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How to deal with different adn lenghts in the making of a phylogenetic tree?

serjaumen22

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A year ago

How to deal with different adn lenghts in the making of a phylogenetic tree?

I´m creating a phylogenetic tree algorithm that will classify species according it's beta globine of hemoglobin and sequences, but I' don't know how to deal with sequences of different lengths.

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fan198

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#1

A year ago

I think you need to align it with some kind of reference or maybe you can use one of the data as reference, then do some alignment like ATTTA and ATA into ATTTA and AT--A, then calculate the distance.

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